Why GitLab Fails with “Operation Not Permitted” on Windows Using Podman

If you run GitLab (or any application that modifies file permissions or ownership of files in volume mounts) in a container, you may see the installation fail with an error like:

chgrp: changing group of '/var/opt/gitlab/git-data/repositories': Operation not permitted

This error prevents GitLab from starting. Here’s why it happens—and the simplest way to fix it.

A local GitLab installation was required to troubleshoot and verify several production-critical queries. This setup is clearly not intended for production use and should be used only for testing and troubleshooting purposes.

Also, Windows is not officially supported as the images have known compatibility issues with volume permissions and potentially other unknown issues (although, I haven’t noticed any issues during a week)

Both Podman Desktop and Docker Desktop run containers by using WSL2

The problem appears when you bind-mount a Windows directory (NTFS) into the container, for example:

E:\volumes\gitlab\data → /var/opt/gitlab
podman run --detach --hostname gitlab.example.com `
--env GITLAB_OMNIBUS_CONFIG="external_url 'http://gitlab.example.com'" `
--publish 443:443 --publish 80:80 --publish 22:22 ` 
--name gitlab --restart always `  
--volume /e/volumes/gitlab/config:/etc/gitlab `
--volume /e/volumes/gitlab/logs:/var/log/gitlab `
--volume /e/volumes/gitlab/data:/var/opt/gitlab `
gitlab/gitlab-ce:18.5.4-ce.0

The same command works fine with Docker Desktop (E is an external disk drive available to Windows host)

What goes wrong

So far, we have the following flow:

  • GitLab requires real Linux filesystem permissions and ownership
  • During startup, it runs chown and chgrp on its data directories
  • Windows filesystems (NTFS) do not support Linux UID/GID ownership
  • WSL2 cannot translate these permission changes correctly
  • The operation fails, and GitLab refuses to start

If both Podman and Docker are based on WSL2, why does Docker run GitLab on an E: drive without breaking a sweat? The root cause is the difference in how Docker and Podman translate file permissions.

Docker: if GitLab calls chgrp, WSL’s drvfs layer intercepts the call. It doesn’t actually change the Windows folder, but it records the “permission change” in a hidden metadata area (NTFS Extended Attributes).

/etc/wsl.conf content of the docker desktop engine:

[automount]
root = /mnt/host
options = "metadata"
[interop]
enabled = true

When metadata is enabled as a mount option in WSL, extended attributes on Windows NT files can be added and interpreted to supply Linux file system permissions.

Podman: mounts Windows drives using the standard WSL2 9p protocol and drvfs driver (as Docker actually) without the complex metadata mapping enabled by default. When GitLab/your app tries to set its required ownership, the mount simply refuses, causing the container to crash

Here is an output for E disk drive mount from the podman machine:

mount | grep " /mnt/e "
E:\ on /mnt/e type 9p (rw,noatime,aname=drvfs;path=E:\;uid=1000;gid=1000;symlinkroot=/mnt/,cache=5,access=client,msize=65536,trans=fd,rfd=5,wfd=5)

there is no metadata option for the mount because of such simple wsl.conf:

[user]
default=user

Solution

The easiest solution here is to use named volumes (universal and faster) or a bind mount (if Docker is used; slower); custom wsl.conf and bind mount (if Podman is used; slower)

Named volumes:

podman run --detach --hostname gitlab.example.com `
--env GITLAB_OMNIBUS_CONFIG="external_url 'http://gitlab.example.com'" ` 
--publish 443:443 --publish 80:80 --publish 22:22 ` 
--name gitlab --restart always ` 
--volume gitlab-config:/etc/gitlab `
--volume gitlab-logs:/var/log/gitlab ` 
--volume gitlab-data:/var/opt/gitlab `
gitlab/gitlab-ce:18.5.4-ce.0

and the data will be stored at /var/lib/containers/storage/volumes (podman machine in this example):

Can be accessed from Windows Explorer as well:

  • Docker: \\wsl$\docker-desktop\mnt\docker-desktop-disk\data\docker\volumes
  • Podman: \\wsl$\podman-machine-default\var\lib\containers\storage\volumes

Bind mounts:

docker run --detach `
  --hostname gitlab.example.com `
  --publish 443:443 --publish 80:80 --publish 22:22 `
  --name gitlab-bind-mount `
  --restart always `
  --volume /e/volumes/gitlab/config:/etc/gitlab `
  --volume /e/volumes/gitlab/logs:/var/log/gitlab `
  --volume /e/volumes/gitlab/data:/var/opt/gitlab `
  gitlab/gitlab-ce:18.5.4-ce.0

Custom wsl.conf (podman):

[automount]
options = "metadata"

[user]
default=user

[interop] enabled=true is not actually required since it’s true by default, then restart podman and try podman run again


Docker and Podman use different WSL default configurations. Docker tolerates emulated ownership changes by enabling the metadata option out of the box.

Podman, on the other hand, does not rely on this metadata and expects real Linux filesystem behavior. It is also daemonless and lighter than Docker—but that’s a story for another blog post.

Technical Review: Learn PowerShell in a Month of Lunches, Fourth Edition

Let me continue with a series of blog posts discussing technical reviews conducted between 2022 and the present year. In a previous post, I highlighted “Learn PowerShell in a Month of Lunches” as the ideal starting point for anyone delving into PowerShell.

If you’ve never read any book from the “Learn <Something> in a Month of Lunches” series, these books are unique because each chapter contains clear explanations, examples, and practical lab tasks at the end to reinforce the chapter’s topic. Such books are designed to streamline your learning process. As evident from the table of contents, there are approximately 30 chapters or fewer. By dedicating just one day to each chapter, you can master the technology in just one month.

Having reviewed this book myself, I found it immensely valuable. The authors, PowerShell team members Travis Plunk and Tyler Leonhardt, alongside Microsoft MVP James Petty, have updated the third edition to encompass the latest version of PowerShell, which includes its expansion into multiple platforms such as Linux and macOS. Consequently, the book is no longer confined to Windows.

Let’s examine the table of contents to see what you’ll be able to accomplish with PowerShell after reading the book.

:: Table of Contents ::

1 Before you begin
2 Meet PowerShell
3 Using the help system
4 Running commands
5 Working with providers
6 The pipeline: Connecting commands
7 Adding commands
8 Objects: Data by another name
9 A practical interlude
10 The pipeline, deeper
11 Formatting: And why it’s done on the right
12 Filtering and comparisons
13 Remote control: One-to-one and one-to-many
14 Multitasking with background jobs
15 Working with many objects, one at a time
16 Variables: A place to store your stuff
17 Input and output
18 Sessions: Remote control with less work
19 You call this scripting?
20 Improving your parameterized script
21 Using regular expressions to parse text files
22 Using someone else’s script
23 Adding logic and loops
24 Handling errors
25 Debugging techniques
26 Tips, tricks, and techniques
27 Never the end
App. PowerShell cheat sheet

Is this book for you? If you’re an Administrator, DevOps Engineer, or even a developer, you’ll undoubtedly find the book extremely useful and easy to follow. It covers topics such as handling errors, loops, filtering and comparison, input and output, and much more. After reading at least two editions myself, I highly recommend this book as one of my favorites, given its well-structured content (chapter-labs-summary). Rating 10/10.